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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9795 and 9796 are separated by 782 nucleotides
9796 and 9797 are separated by 244 nucleotides
9797 and 9798 are separated by 780 nucleotides
9798 and 9799 are separated by 258 nucleotides
mRNA_1427: 9795 - Hypothetical Protein, at 258,991 to 261,200
9795
mRNA_1428: 9796 - HMMPfam-Protein of unknown function (DUF3237)-PF11578, at 261,983 to 262,469
9796
mRNA_1429: 9797 - HMMPfam-Protein of unknown function (DUF3237)-PF11578, at 262,714 to 263,546
9797
mRNA_1430: 9798 - KOG4205 RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1, at 264,327 to 265,821
9798
mRNA_1431: 9799 - Hypothetical Protein, at 266,080 to 266,508
9799
Group
Condition
mRNA
_1427
mRNA
_1428
mRNA
_1429
mRNA
_1430
mRNA
_1431
9795
9796
9797
9798
9799
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-1.7
-2.6
-0.2
-0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-1.5
-0.3
-0.6
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
-1.0
-1.0
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
-0.9
-0.4
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.6
-0.8
-0.7
+0.2
auxotrophy
YNB Glucose
N.D.
-0.3
-0.1
-0.5
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.0
+0.1
-1.1
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.4
+0.5
-1.0
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.5
+0.4
-0.8
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-1.0
+0.4
-0.1
+0.1
growth on ypd
YPD
N.D.
+0.0
-0.5
-0.0
+0.2
auxotrophy
Dropout Complete
N.D.
+0.1
-0.4
-0.4
+0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
-0.3
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.6
+0.5
+0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.8
-0.3
-0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.2
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.5
+0.3
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
+0.4
+0.4
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.4
+0.4
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
+0.9
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.7
+0.3
+0.5
-0.2
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