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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9805 and 9806 are separated by 1301 nucleotides
9806 and 9807 are separated by 317 nucleotides
9807 and 9808 are separated by 198 nucleotides
9808 and 9809 are separated by 300 nucleotides
mRNA_1437: 9805 - K01526 E3.6.1.42 guanosine-diphosphatase, at 277,575 to 279,045
9805
mRNA_1438: 9806 - Hypothetical Protein, at 280,347 to 281,494
9806
mRNA_1439: 9807 - K03544 clpX, CLPX ATP-dependent Clp protease ATP-binding subunit ClpX, at 281,812 to 284,553
9807
mRNA_1440: 9808 - Hypothetical Protein, at 284,752 to 285,459
9808
mRNA_1441: 9809 - K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic), at 285,760 to 287,814
9809
Group
Condition
mRNA
_1437
mRNA
_1438
mRNA
_1439
mRNA
_1440
mRNA
_1441
9805
9806
9807
9808
9809
facs on lipid accumulation
Sorted No BODIPY Gate
-2.2
-0.2
-0.1
-1.0
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.2
+0.4
-0.2
-0.3
-0.1
auxotrophy
Dropout Complete
-1.7
-0.6
-0.0
-0.1
+0.1
growth on oleic acid
YNB Glucose
-1.8
-0.3
+0.0
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-1.6
-0.2
-0.3
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.9
-0.2
-0.2
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
-0.3
-0.0
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.3
-0.3
+0.3
-0.1
auxotrophy
YNB Glucose
-0.2
-0.3
-0.0
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.6
-0.1
-0.1
-0.2
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
-0.1
-0.5
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-1.3
+0.2
-0.0
+0.3
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.2
-0.1
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.3
-0.0
-0.2
+0.0
growth on ypd
YPD
-0.4
+0.4
-0.2
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
-0.1
-0.3
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.3
-0.1
+0.4
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.8
+0.2
-0.2
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+1.8
-0.4
+0.1
-0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+1.4
+0.2
+0.0
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
+1.4
-0.0
+0.1
+0.1
+0.5
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