Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9813 and 9814 are separated by 1345 nucleotides
9814 and 9815 are separated by 687 nucleotides
9815 and 9816 are separated by 2372 nucleotides
9816 and 9817 are separated by 377 nucleotides
mRNA_1445: 9813 - K20045 ITSN intersectin, at 295,295 to 301,799
9813
mRNA_1446: 9814 - BLAST Mucin-17 [Rhizoctonia solani], at 303,145 to 306,587
9814
mRNA_1447: 9815 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 307,275 to 311,482
9815
mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313,855 to 315,152
9816
mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315,530 to 317,378
9817
Group
Condition
mRNA
_1445
mRNA
_1446
mRNA
_1447
mRNA
_1448
mRNA
_1449
9813
9814
9815
9816
9817
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
+0.1
-0.9
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
-0.2
-0.6
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
N.D.
-0.2
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
+0.1
-0.0
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.0
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
N.D.
-0.0
+0.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.1
-0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
+0.2
+0.1
-0.3
growth on ypd
YPD
-0.1
N.D.
+0.2
-0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
N.D.
-0.1
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
N.D.
-0.2
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
N.D.
-0.1
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.1
-0.0
-0.1
auxotrophy
YNB Glucose
+0.2
N.D.
-0.2
-0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
N.D.
-0.0
-0.0
-0.2
auxotrophy
Dropout Complete
+0.0
N.D.
-0.1
+0.1
+0.1
growth on oleic acid
YNB Glucose
+0.2
N.D.
-0.0
+0.2
-0.2
growth on oleic acid
YNB Oleic Acid
+0.2
N.D.
-0.1
+0.3
-0.3
growth on ricinoleic acid
YNB Glucose
+0.2
N.D.
+0.2
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
N.D.
-0.1
+0.2
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
-0.1
+3.6
-0.8
remove
mRNA_1445
plot
remove
mRNA_1446
plot
remove
mRNA_1447
remove
mRNA_1448
plot
remove
mRNA_1449
plot