Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9813 and 9814 are separated by 1345 nucleotides9814 and 9815 are separated by 687 nucleotides9815 and 9816 are separated by 2372 nucleotides9816 and 9817 are separated by 377 nucleotides mRNA_1445: 9813 - K20045 ITSN intersectin, at 295,295 to 301,799 9813 mRNA_1446: 9814 - BLAST Mucin-17 [Rhizoctonia solani], at 303,145 to 306,587 9814 mRNA_1447: 9815 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 307,275 to 311,482 9815 mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313,855 to 315,152 9816 mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315,530 to 317,378 9817
Group Condition mRNA_1445 mRNA_1446 mRNA_1447 mRNA_1448 mRNA_1449
9813 9814 9815 9816 9817
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. +0.1 -0.9 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.2 -0.6 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -0.2 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.1 -0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.0 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. -0.0 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. -0.1 -0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. +0.2 +0.1 -0.3
growth on ypd YPD -0.1 N.D. +0.2 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.1 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. -0.2 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. -0.1 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 -0.0 -0.1
auxotrophy YNB Glucose +0.2 N.D. -0.2 -0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -0.0 -0.0 -0.2
auxotrophy Dropout Complete +0.0 N.D. -0.1 +0.1 +0.1
growth on oleic acid YNB Glucose +0.2 N.D. -0.0 +0.2 -0.2
growth on oleic acid YNB Oleic Acid +0.2 N.D. -0.1 +0.3 -0.3
growth on ricinoleic acid YNB Glucose +0.2 N.D. +0.2 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. -0.1 +0.2 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.1 +3.6 -0.8
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