Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9814 and 9815 are separated by 687 nucleotides9815 and 9816 are separated by 2372 nucleotides9816 and 9817 are separated by 377 nucleotides9817 and 9818 are separated by 342 nucleotides mRNA_1446: 9814 - BLAST Mucin-17 [Rhizoctonia solani], at 303,145 to 306,587 9814 mRNA_1447: 9815 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 307,275 to 311,482 9815 mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313,855 to 315,152 9816 mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315,530 to 317,378 9817 mRNA_1450: 9818 - K20826 RPAP1 RNA polymerase II-associated protein 1, at 317,721 to 321,691 9818
Group Condition mRNA_1446 mRNA_1447 mRNA_1448 mRNA_1449 mRNA_1450
9814 9815 9816 9817 9818
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.9 -0.5 -2.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.1 -0.4 -1.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.3 -0.1 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.3 -0.1 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 -0.6 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.0 +0.0 -0.3 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.3 -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.0 +0.0 -0.5
auxotrophy Dropout Complete N.D. -0.1 +0.1 +0.1 -0.7
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 -0.1 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.0 -0.5 +0.0
growth on oleic acid YNB Glucose N.D. -0.0 +0.2 -0.2 -0.3
auxotrophy YNB Glucose N.D. -0.2 -0.1 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.2 +0.3 -0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.1 -0.3 -0.1
growth on ypd YPD N.D. +0.2 -0.2 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.0 -0.1 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.3 -0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -0.0 -0.2 +1.0
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.3 -0.1 +0.8
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +3.6 -0.8 -1.5
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