Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9816 and 9817 are separated by 377 nucleotides9817 and 9818 are separated by 342 nucleotides9818 and 9819 are separated by 140 nucleotides9819 and 9820 are separated by 479 nucleotides mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313,855 to 315,152 9816 mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315,530 to 317,378 9817 mRNA_1450: 9818 - K20826 RPAP1 RNA polymerase II-associated protein 1, at 317,721 to 321,691 9818 mRNA_1451: 9819 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 321,832 to 325,764 9819 mRNA_1452: 9820 - K07241 nixA high-affinity nickel-transport protein, at 326,244 to 328,401 9820
Group Condition mRNA_1448 mRNA_1449 mRNA_1450 mRNA_1451 mRNA_1452
9816 9817 9818 9819 9820
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.5 -2.3 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 -1.1 -0.3 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.2 -0.2 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 -0.7 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 -0.8 -0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.1 -0.4 -0.3 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 +0.0 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.3 -0.6 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.1 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 -0.5 -0.1 -0.1
growth on oleic acid YNB Glucose +0.2 -0.2 -0.3 -0.1 -0.2
growth on ypd YPD -0.2 -0.1 +0.0 -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.1 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.3 -0.6 +0.1 -0.2
auxotrophy Dropout Complete +0.1 +0.1 -0.7 -0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 +1.0 -0.1 -0.6
auxotrophy YNB Glucose -0.1 +0.0 -0.1 -0.1 +0.3
growth on oleic acid YNB Oleic Acid +0.3 -0.3 +0.2 +0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.3 -0.1 +0.4 +0.3
growth on ricinoleic acid YNB Glucose +0.3 -0.1 +0.8 -0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +3.6 -0.8 -1.5 +0.1 -0.4
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