Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9819 and 9820 are separated by 479 nucleotides9820 and 9821 are separated by 189 nucleotides9821 and 9822 are separated by 158 nucleotides9822 and 9823 are separated by 192 nucleotides mRNA_1451: 9819 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 321,832 to 325,764 9819 mRNA_1452: 9820 - K07241 nixA high-affinity nickel-transport protein, at 326,244 to 328,401 9820 mRNA_1453: 9821 - HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443, at 328,591 to 330,027 9821 mRNA_1454: 9822 - K11390 CLYBL citrate lyase subunit beta-like protein, at 330,186 to 331,593 9822 mRNA_1455: 9823 - BLAST patatin-like phospholipase domain protein [Rhizoctoni..., at 331,786 to 334,001 9823
Group Condition mRNA_1451 mRNA_1452 mRNA_1453 mRNA_1454 mRNA_1455
9819 9820 9821 9822 9823
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 -1.0 -0.6 -0.1
growth on ypd YPD -0.0 -0.0 -0.2 -0.4 -0.2
growth on oleic acid YNB Glucose -0.1 -0.2 -0.0 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.4 -0.7 -0.3 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.9 +0.1 +0.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.4 -0.4 +0.4 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 -0.0 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.3 -0.4 -0.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.6 -0.1 +0.0 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.2 -0.7 +0.1 +0.2
growth on ricinoleic acid YNB Glucose -0.1 -0.4 -0.0 +0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.4 +0.1 +0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 +0.2 +0.3 -0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.0 -0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 +0.1 +0.0 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 -0.4 +0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 -0.1 +0.3 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.2 +0.7 +0.1
auxotrophy Dropout Complete -0.1 +0.4 -0.1 +0.5 -0.2
auxotrophy YNB Glucose -0.1 +0.3 -0.3 +0.7 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 +0.5 +0.5 -0.1
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