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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9822 and 9823 are separated by 192 nucleotides
9823 and 9824 are separated by 619 nucleotides
9824 and 9825 are separated by 785 nucleotides
9825 and 9826 are separated by 724 nucleotides
mRNA_1454: 9822 - K11390 CLYBL citrate lyase subunit beta-like protein, at 330,186 to 331,593
9822
mRNA_1455: 9823 - BLAST patatin-like phospholipase domain protein [Rhizoctoni..., at 331,786 to 334,001
9823
mRNA_1456: 9824 - Hypothetical Protein, at 334,621 to 335,519
9824
mRNA_1457: 9825 - K00549 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, at 336,305 to 339,274
9825
mRNA_1458: 9826 - K17775 MDM34, MMM2 mitochondrial distribution and morphology protein 34, at 339,999 to 342,727
9826
Group
Condition
mRNA
_1454
mRNA
_1455
mRNA
_1456
mRNA
_1457
mRNA
_1458
9822
9823
9824
9825
9826
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
+0.1
-0.9
-2.5
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.1
-0.3
-1.8
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.6
-0.5
-2.6
-0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
-1.0
-2.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.3
-0.1
-2.7
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.7
+0.1
-1.4
-1.9
+0.1
growth on ypd
YPD
-0.4
-0.2
-0.4
-0.7
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.4
-0.4
-2.6
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.5
-1.1
-0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
+0.4
-2.2
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.6
+0.3
-2.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.4
-0.1
-2.2
+0.2
growth on ricinoleic acid
YNB Glucose
+0.3
+0.3
+0.8
-2.8
-0.3
auxotrophy
YNB Glucose
+0.7
+0.1
-0.2
-2.3
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.3
+0.3
-1.6
-0.3
auxotrophy
Dropout Complete
+0.5
-0.2
-1.0
-0.7
+0.3
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
+0.8
-2.6
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
-0.4
+0.2
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.2
+0.3
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.7
-0.2
-0.7
+0.3
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.5
-0.1
+0.9
-0.2
-0.3
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