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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9823 and 9824 are separated by 619 nucleotides
9824 and 9825 are separated by 785 nucleotides
9825 and 9826 are separated by 724 nucleotides
9826 and 9827 are separated by 166 nucleotides
mRNA_1455: 9823 - BLAST patatin-like phospholipase domain protein [Rhizoctoni..., at 331,786 to 334,001
9823
mRNA_1456: 9824 - Hypothetical Protein, at 334,621 to 335,519
9824
mRNA_1457: 9825 - K00549 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, at 336,305 to 339,274
9825
mRNA_1458: 9826 - K17775 MDM34, MMM2 mitochondrial distribution and morphology protein 34, at 339,999 to 342,727
9826
mRNA_1459: 9827 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 342,894 to 344,123
9827
Group
Condition
mRNA
_1455
mRNA
_1456
mRNA
_1457
mRNA
_1458
mRNA
_1459
9823
9824
9825
9826
9827
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.9
-2.5
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-1.0
-2.2
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.5
-2.6
-0.9
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-1.4
-1.9
+0.1
+0.0
growth on oleic acid
YNB Glucose
-0.3
-0.1
-2.7
+0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
-1.8
-1.0
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-1.1
-0.4
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.4
-2.6
+0.4
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.4
-2.2
-0.5
-0.1
growth on ricinoleic acid
YNB Glucose
+0.3
+0.8
-2.8
-0.3
-0.1
auxotrophy
YNB Glucose
+0.1
-0.2
-2.3
+0.5
-0.0
growth on ypd
YPD
-0.2
-0.4
-0.7
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
-2.2
+0.2
-0.1
auxotrophy
Dropout Complete
-0.2
-1.0
-0.7
+0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
+0.3
-2.4
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.3
-1.6
-0.3
-0.0
growth on oleic acid
YNB Oleic Acid
+0.2
+0.8
-2.6
+0.5
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.4
+0.2
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.7
+0.3
+0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.3
-0.2
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.9
-0.2
-0.3
+0.1
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