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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9826 and 9827 are separated by 166 nucleotides
9827 and 9828 are separated by 577 nucleotides
9828 and 9829 are separated by 700 nucleotides
9829 and 9830 are separated by 349 nucleotides
mRNA_1458: 9826 - K17775 MDM34, MMM2 mitochondrial distribution and morphology protein 34, at 339,999 to 342,727
9826
mRNA_1459: 9827 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 342,894 to 344,123
9827
mRNA_1460: 9828 - K06911 K06911 uncharacterized protein, at 344,701 to 345,995
9828
mRNA_1461: 9829 - K02503 HINT1, hinT, hit histidine triad (HIT) family protein, at 346,696 to 347,592
9829
mRNA_1462: 9830 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 347,942 to 349,022
9830
Group
Condition
mRNA
_1458
mRNA
_1459
mRNA
_1460
mRNA
_1461
mRNA
_1462
9826
9827
9828
9829
9830
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.1
+0.1
-1.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.0
-0.0
-0.9
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
-0.8
+0.3
N.D.
growth on ypd
YPD
-0.6
-0.1
+0.2
-0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.1
-0.0
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
-0.3
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
+0.2
-0.6
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.1
+0.2
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.3
+0.2
-0.6
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
+0.1
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.5
+0.3
+0.5
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.1
+0.1
-0.4
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
+0.0
+0.5
+0.4
N.D.
auxotrophy
Dropout Complete
+0.3
-0.2
+0.3
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
+0.5
+0.4
+0.4
N.D.
auxotrophy
YNB Glucose
+0.5
-0.0
+0.3
-0.5
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
+0.2
+0.6
N.D.
growth on oleic acid
YNB Glucose
+0.2
+0.1
+0.2
-0.0
N.D.
growth on oleic acid
YNB Oleic Acid
+0.5
-0.1
+0.4
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
+0.4
+0.7
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.1
+0.5
+1.3
N.D.
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