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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9829 and 9830 are separated by 349 nucleotides
9830 and 9831 are separated by 236 nucleotides
9831 and 9832 are separated by 273 nucleotides
9832 and 9833 are separated by 281 nucleotides
mRNA_1461: 9829 - K02503 HINT1, hinT, hit histidine triad (HIT) family protein, at 346,696 to 347,592
9829
mRNA_1462: 9830 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 347,942 to 349,022
9830
mRNA_1463: 9831 - K08850 AURKX aurora kinase, other, at 349,259 to 351,388
9831
mRNA_1464: 9832 - BLAST conidiation protein Con-6, putative [Aspergillus ..., at 351,662 to 352,112
9832
mRNA_1465: 9833 - Hypothetical Protein, at 352,394 to 352,564
9833
Group
Condition
mRNA
_1461
mRNA
_1462
mRNA
_1463
mRNA
_1464
mRNA
_1465
9829
9830
9831
9832
9833
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.6
N.D.
N.D.
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.6
N.D.
N.D.
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
N.D.
N.D.
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.4
N.D.
N.D.
-0.3
N.D.
auxotrophy
YNB Glucose
-0.5
N.D.
N.D.
-0.1
N.D.
growth on oleic acid
YNB Glucose
-0.0
N.D.
N.D.
-0.5
N.D.
growth on ypd
YPD
-0.3
N.D.
N.D.
-0.0
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
N.D.
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
N.D.
N.D.
+0.8
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
N.D.
-0.0
N.D.
auxotrophy
Dropout Complete
-0.3
N.D.
N.D.
+0.5
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
N.D.
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
N.D.
N.D.
+0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
N.D.
N.D.
+0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
N.D.
N.D.
+0.6
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.2
N.D.
N.D.
+0.9
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
N.D.
N.D.
+0.5
N.D.
growth on ricinoleic acid
YNB Glucose
+0.6
N.D.
N.D.
+0.5
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
N.D.
N.D.
+0.6
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
N.D.
N.D.
+0.8
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.3
N.D.
N.D.
+0.4
N.D.
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