Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9832 and 9833 are separated by 281 nucleotides9833 and 9834 are separated by 90 nucleotides9834 and 9835 are separated by 359 nucleotides9835 and 9836 are separated by 1727 nucleotides mRNA_1464: 9832 - BLAST conidiation protein Con-6, putative [Aspergillus ..., at 351,662 to 352,112 9832 mRNA_1465: 9833 - Hypothetical Protein, at 352,394 to 352,564 9833 mRNA_1466: 9834 - BLAST putative catalytic domain thiamin pyrophosphokinase [..., at 352,655 to 354,087 9834 mRNA_1467: 9835 - HMMPfam-Mannosyl oligosaccharide glucosidase-PF03200,SUPERFAMILY--SSF48208, at 354,447 to 358,959 9835 mRNA_1468: 9836 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 360,687 to 364,959 9836
Group Condition mRNA_1464 mRNA_1465 mRNA_1466 mRNA_1467 mRNA_1468
9832 9833 9834 9835 9836
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -0.1 -3.3 -2.9
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 N.D. +0.1 -1.0 -3.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 N.D. -1.6 -0.9 -1.2
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.9 -0.5 -1.4
auxotrophy Dropout Complete +0.5 N.D. -0.5 -0.6 -1.2
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.4 -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. -0.2 -0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.2 -0.6 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +0.2 -0.5 -0.9
auxotrophy YNB Glucose -0.1 N.D. +0.0 -0.2 -0.2
growth on oleic acid YNB Glucose -0.5 N.D. -0.2 +0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.1 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. +0.3 -0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.1 +0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.5 N.D. +0.0 +0.0 -0.3
growth on ypd YPD -0.0 N.D. +0.2 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 N.D. +0.4 -0.4 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. +0.3 +0.5 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. +0.7 -0.4 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.9 N.D. +0.1 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 N.D. +0.8 +0.2 -0.0
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