Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9838 and 9839 are separated by 253 nucleotides9839 and 9840 are separated by 475 nucleotides9840 and 9841 are separated by 463 nucleotides9841 and 9842 are separated by 614 nucleotides mRNA_1470: 9838 - K18592 GGT1_5, CD224 gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase, at 368,201 to 370,453 9838 mRNA_1471: 9839 - K08874 TRRAP transformation/transcription domain-associated protein, at 370,707 to 382,935 9839 mRNA_1472: 9840 - HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF00097,ProSitePatterns-Zinc finger RING-type signature.-PS00518,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 383,411 to 384,622 9840 mRNA_1473: 9841 - KOG0254 Predicted transporter (major facilitator superfamily), at 385,086 to 387,836 9841 mRNA_1474: 9842 - Hypothetical Protein, at 388,451 to 391,356 9842
Group Condition mRNA_1470 mRNA_1471 mRNA_1472 mRNA_1473 mRNA_1474
9838 9839 9840 9841 9842
growth on oleic acid YNB Glucose +0.0 -3.0 -0.2 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -2.6 -0.6 +0.4 +0.4
growth on oleic acid YNB Oleic Acid +0.2 -2.4 +0.1 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -1.0 -0.6 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -1.7 -0.4 -0.0 +0.0
auxotrophy Dropout Complete +0.1 -2.2 +0.1 +0.0 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 -3.1 -0.0 +0.3 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.9 -0.1 -0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 -1.4 +0.1 -0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -1.3 -0.0 +0.8 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -1.2 +0.1 +0.7 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.3 +0.2 +0.2 +0.0
growth on ricinoleic acid YNB Glucose +0.0 -1.5 +0.3 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.0 -0.1 -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.5 +0.0 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 -0.4 +0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.5 +0.2 +0.1 +0.1
auxotrophy YNB Glucose +0.1 +0.1 -0.0 -0.1 +0.2
growth on ypd YPD -0.5 +0.8 +0.4 -0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 +0.1 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.5 +0.2 -0.1 +0.1
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