Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9839 and 9840 are separated by 475 nucleotides9840 and 9841 are separated by 463 nucleotides9841 and 9842 are separated by 614 nucleotides9842 and 9843 are separated by 478 nucleotides mRNA_1471: 9839 - K08874 TRRAP transformation/transcription domain-associated protein, at 370,707 to 382,935 9839 mRNA_1472: 9840 - HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF00097,ProSitePatterns-Zinc finger RING-type signature.-PS00518,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 383,411 to 384,622 9840 mRNA_1473: 9841 - KOG0254 Predicted transporter (major facilitator superfamily), at 385,086 to 387,836 9841 mRNA_1474: 9842 - Hypothetical Protein, at 388,451 to 391,356 9842 mRNA_1475: 9843 - K07374 TUBA tubulin alpha, at 391,835 to 393,525 9843
Group Condition mRNA_1471 mRNA_1472 mRNA_1473 mRNA_1474 mRNA_1475
9839 9840 9841 9842 9843
growth on oleic acid YNB Glucose -3.0 -0.2 +0.1 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -2.6 -0.6 +0.4 +0.4 N.D.
growth on oleic acid YNB Oleic Acid -2.4 +0.1 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -3.1 -0.0 +0.3 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.7 -0.4 -0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 -0.6 -0.2 -0.1 N.D.
auxotrophy Dropout Complete -2.2 +0.1 +0.0 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 -0.1 -0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -1.4 +0.1 -0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 -0.3 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 -0.0 +0.8 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.0 -0.1 +0.2 N.D.
growth on ricinoleic acid YNB Glucose -1.5 +0.3 +0.6 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 +0.1 +0.7 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.5 +0.2 +0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.2 +0.2 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.4 +0.3 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 -0.0 +0.1 N.D.
auxotrophy YNB Glucose +0.1 -0.0 -0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.2 -0.1 +0.1 N.D.
growth on ypd YPD +0.8 +0.4 -0.0 -0.4 N.D.
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