Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9840 and 9841 are separated by 463 nucleotides9841 and 9842 are separated by 614 nucleotides9842 and 9843 are separated by 478 nucleotides9843 and 9844 are separated by 2862 nucleotides mRNA_1472: 9840 - HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF00097,ProSitePatterns-Zinc finger RING-type signature.-PS00518,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 383,411 to 384,622 9840 mRNA_1473: 9841 - KOG0254 Predicted transporter (major facilitator superfamily), at 385,086 to 387,836 9841 mRNA_1474: 9842 - Hypothetical Protein, at 388,451 to 391,356 9842 mRNA_1475: 9843 - K07374 TUBA tubulin alpha, at 391,835 to 393,525 9843 mRNA_1476: 9844 - Hypothetical Protein, at 396,388 to 397,424 9844
Group Condition mRNA_1472 mRNA_1473 mRNA_1474 mRNA_1475 mRNA_1476
9840 9841 9842 9843 9844
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.2 -0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 -0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 -0.2 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.0 +0.0 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.3 +0.2 N.D. -0.1
growth on oleic acid YNB Glucose -0.2 +0.1 +0.1 N.D. -0.0
auxotrophy YNB Glucose -0.0 -0.1 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 +0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 +0.2 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.4 +0.4 N.D. -0.0
growth on ypd YPD +0.4 -0.0 -0.4 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 +0.1 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 +0.1 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.2 -0.2 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.1 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 +0.0 N.D. -0.0
auxotrophy Dropout Complete +0.1 +0.0 +0.3 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.3 +0.5 N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.7 -0.0 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.3 +0.6 +0.1 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.8 +0.1 N.D. +0.3
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