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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9843 and 9844 are separated by 2862 nucleotides
9844 and 9845 are separated by 447 nucleotides
9845 and 9846 are separated by 626 nucleotides
9846 and 9847 are separated by 476 nucleotides
mRNA_1475: 9843 - K07374 TUBA tubulin alpha, at 391,835 to 393,525
9843
mRNA_1476: 9844 - Hypothetical Protein, at 396,388 to 397,424
9844
mRNA_1477: 9845 - Hypothetical Protein, at 397,872 to 399,169
9845
mRNA_1478: 9846 - Hypothetical Protein, at 399,796 to 400,850
9846
mRNA_1479: 9847 - ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 401,327 to 402,379
9847
Group
Condition
mRNA
_1475
mRNA
_1476
mRNA
_1477
mRNA
_1478
mRNA
_1479
9843
9844
9845
9846
9847
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
-0.2
+0.0
-0.8
growth on oleic acid
YNB Glucose
N.D.
-0.0
-0.2
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
-0.1
-0.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.0
-0.3
-0.4
+0.1
growth on ypd
YPD
N.D.
+0.1
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-0.1
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
-0.1
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
-0.1
-0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
-0.0
+0.2
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
+0.3
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.1
-0.5
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
-0.1
+0.0
-0.3
auxotrophy
YNB Glucose
N.D.
-0.1
-0.0
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
-0.1
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
-0.0
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
-0.2
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
+0.1
-0.2
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
+0.3
-0.2
+0.1
auxotrophy
Dropout Complete
N.D.
+0.0
+0.2
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
-0.1
+0.4
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.0
+0.7
+0.0
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