Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9845 and 9846 are separated by 626 nucleotides
9846 and 9847 are separated by 476 nucleotides
9847 and 9848 are separated by 1123 nucleotides
9848 and 9849 are separated by 126 nucleotides
mRNA_1477: 9845 - Hypothetical Protein, at 397,872 to 399,169
9845
mRNA_1478: 9846 - Hypothetical Protein, at 399,796 to 400,850
9846
mRNA_1479: 9847 - ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 401,327 to 402,379
9847
mRNA_1480: 9848 - KOG0254 Predicted transporter (major facilitator superfamily), at 403,503 to 404,169
9848
mRNA_1481: 9849 - Hypothetical Protein, at 404,296 to 404,872
9849
Group
Condition
mRNA
_1477
mRNA
_1478
mRNA
_1479
mRNA
_1480
mRNA
_1481
9845
9846
9847
9848
9849
growth on ypd
YPD
-0.2
-0.2
-0.2
-1.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.4
+0.1
-1.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.0
-0.8
-0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.5
+0.1
-0.7
N.D.
growth on oleic acid
YNB Glucose
-0.2
-0.2
-0.4
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.3
-0.3
-0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.3
-0.1
-0.6
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.2
+0.3
-0.9
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.2
+0.1
-0.4
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.2
-0.7
+0.4
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
+0.0
-0.3
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.4
+0.1
-0.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
-0.4
+0.6
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.4
-0.2
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.2
-0.1
+0.6
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
-0.2
+1.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.7
+0.0
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.0
+0.1
-0.1
+1.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
+0.1
+1.6
N.D.
auxotrophy
YNB Glucose
-0.0
-0.0
-0.1
+1.4
N.D.
auxotrophy
Dropout Complete
+0.2
-0.2
+0.2
+1.7
N.D.
remove
mRNA_1477
plot
remove
mRNA_1478
plot
remove
mRNA_1479
remove
mRNA_1480
plot
remove
mRNA_1481
plot