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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9846 and 9847 are separated by 476 nucleotides
9847 and 9848 are separated by 1123 nucleotides
9848 and 9849 are separated by 126 nucleotides
9849 and 9850 are separated by 4139 nucleotides
mRNA_1478: 9846 - Hypothetical Protein, at 399,796 to 400,850
9846
mRNA_1479: 9847 - ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 401,327 to 402,379
9847
mRNA_1480: 9848 - KOG0254 Predicted transporter (major facilitator superfamily), at 403,503 to 404,169
9848
mRNA_1481: 9849 - Hypothetical Protein, at 404,296 to 404,872
9849
mRNA_1482: 9850 - BLAST zn -c6 transcription factor [Malassezia pachyderm..., at 409,012 to 409,512
9850
Group
Condition
mRNA
_1478
mRNA
_1479
mRNA
_1480
mRNA
_1481
mRNA
_1482
9846
9847
9848
9849
9850
growth on ypd
YPD
-0.2
-0.2
-1.2
N.D.
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.1
-1.1
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.8
-0.4
N.D.
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.1
-0.6
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.3
-0.4
N.D.
-0.2
growth on oleic acid
YNB Glucose
-0.2
-0.4
-0.3
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.5
+0.1
-0.7
N.D.
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.3
-0.9
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.1
-0.4
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.7
+0.4
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.1
-0.4
N.D.
-0.3
growth on oleic acid
YNB Oleic Acid
+0.0
-0.3
+0.4
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.2
+0.1
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.4
+0.6
N.D.
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
+0.6
N.D.
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
+0.0
+0.1
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
+1.1
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
+1.1
N.D.
+0.4
auxotrophy
YNB Glucose
-0.0
-0.1
+1.4
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.1
+1.6
N.D.
+0.3
auxotrophy
Dropout Complete
-0.2
+0.2
+1.7
N.D.
+0.2
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