Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9856 and 9857 are separated by 572 nucleotides9857 and 9858 are separated by 416 nucleotides9858 and 9859 are separated by 1476 nucleotides9859 and 9860 are separated by 769 nucleotides mRNA_1488: 9856 - K15371 GDH2 glutamate dehydrogenase, at 423,330 to 427,670 9856 mRNA_1489: 9857 - K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase, at 428,243 to 429,095 9857 mRNA_1490: 9858 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 429,512 to 431,122 9858 mRNA_1491: 9859 - K04513 RHOA Ras homolog gene family, member A, at 432,599 to 433,571 9859 mRNA_1492: 9860 - K12855 PRPF6, PRP6 pre-mRNA-processing factor 6, at 434,341 to 437,683 9860
Group Condition mRNA_1488 mRNA_1489 mRNA_1490 mRNA_1491 mRNA_1492
9856 9857 9858 9859 9860
growth on oleic acid YNB Oleic Acid -0.6 +0.0 -0.6 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.8 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.7 -0.5 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 -0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.9 +0.3 N.D. N.D.
auxotrophy Dropout Complete -0.2 -0.3 -0.5 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -0.5 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 -0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.5 -0.4 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.5 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 -0.1 N.D. N.D.
growth on oleic acid YNB Glucose -0.2 -0.3 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.3 -0.3 N.D. N.D.
growth on ypd YPD -0.2 +0.1 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 -0.1 N.D. N.D.
auxotrophy YNB Glucose +0.1 -0.1 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 +0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.3 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 +0.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1 +0.7 N.D. N.D.
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