Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9857 and 9858 are separated by 416 nucleotides9858 and 9859 are separated by 1476 nucleotides9859 and 9860 are separated by 769 nucleotides9860 and 9861 are separated by 137 nucleotides mRNA_1489: 9857 - K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase, at 428,243 to 429,095 9857 mRNA_1490: 9858 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 429,512 to 431,122 9858 mRNA_1491: 9859 - K04513 RHOA Ras homolog gene family, member A, at 432,599 to 433,571 9859 mRNA_1492: 9860 - K12855 PRPF6, PRP6 pre-mRNA-processing factor 6, at 434,341 to 437,683 9860 mRNA_1493: 9861 - KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family, at 437,821 to 440,939 9861
Group Condition mRNA_1489 mRNA_1490 mRNA_1491 mRNA_1492 mRNA_1493
9857 9858 9859 9860 9861
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.5 N.D. N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 -0.5 N.D. N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.0 -0.6 N.D. N.D. -0.5
growth on oleic acid YNB Glucose -0.3 -0.1 N.D. N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.6 N.D. N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.4 N.D. N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 N.D. N.D. -0.2
auxotrophy Dropout Complete -0.3 -0.5 N.D. N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.3 N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.9 +0.3 N.D. N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.1 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.2 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.2 N.D. N.D. +0.4
growth on ypd YPD +0.1 -0.3 N.D. N.D. +0.1
auxotrophy YNB Glucose -0.1 -0.3 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 N.D. N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.2 N.D. N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.4 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.0 N.D. N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.7 N.D. N.D. +0.3
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