Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9858 and 9859 are separated by 1476 nucleotides9859 and 9860 are separated by 769 nucleotides9860 and 9861 are separated by 137 nucleotides9861 and 9862 are separated by 2175 nucleotides mRNA_1490: 9858 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 429,512 to 431,122 9858 mRNA_1491: 9859 - K04513 RHOA Ras homolog gene family, member A, at 432,599 to 433,571 9859 mRNA_1492: 9860 - K12855 PRPF6, PRP6 pre-mRNA-processing factor 6, at 434,341 to 437,683 9860 mRNA_1493: 9861 - KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family, at 437,821 to 440,939 9861 mRNA_1494: 9862 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 443,115 to 444,117 9862
Group Condition mRNA_1490 mRNA_1491 mRNA_1492 mRNA_1493 mRNA_1494
9858 9859 9860 9861 9862
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. N.D. -0.5 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. N.D. +0.0 -0.4
growth on oleic acid YNB Oleic Acid -0.6 N.D. N.D. -0.5 +0.4
growth on oleic acid YNB Glucose -0.1 N.D. N.D. -0.6 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. N.D. +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. +0.1 -1.0
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. N.D. -0.0 +0.2
growth on ypd YPD -0.3 N.D. N.D. +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. +0.4 -0.7
auxotrophy Dropout Complete -0.5 N.D. N.D. +0.2 +0.1
auxotrophy YNB Glucose -0.3 N.D. N.D. +0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. N.D. -0.2 +0.5
growth on ricinoleic acid YNB Glucose -0.2 N.D. N.D. -0.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. N.D. +0.1 +0.7
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. +0.2 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 N.D. N.D. +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. N.D. +0.3 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. +0.3 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. N.D. +0.3 +0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. N.D. +0.1 +1.3
ypd buoyancy 40 hrs High Buoyancy +0.4 N.D. N.D. +0.2 +0.8
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