Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9862 and 9863 are separated by 321 nucleotides9863 and 9864 are separated by 525 nucleotides9864 and 9865 are separated by 233 nucleotides9865 and 9866 are separated by 617 nucleotides mRNA_1494: 9862 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 443,115 to 444,117 9862 mRNA_1495: 9863 - Hypothetical Protein, at 444,439 to 447,391 9863 mRNA_1496: 9864 - HMMPfam-Major Facilitator Superfamily-PF07690,PRINTS-Tetracycline resistance protein TetB signature-PR01036,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 447,917 to 450,188 9864 mRNA_1497: 9865 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 450,422 to 453,504 9865 mRNA_1498: 9866 - K11129 NHP2, NOLA2 H/ACA ribonucleoprotein complex subunit 2, at 454,122 to 455,195 9866
Group Condition mRNA_1494 mRNA_1495 mRNA_1496 mRNA_1497 mRNA_1498
9862 9863 9864 9865 9866
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.3 +0.2 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.5 -0.1 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 +0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.3 +0.1 -0.2 N.D.
auxotrophy YNB Glucose -0.0 -0.2 +0.2 -0.1 N.D.
auxotrophy Dropout Complete +0.1 -0.3 +0.2 +0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.4 +0.1 -0.4 -0.1 N.D.
growth on oleic acid YNB Glucose +0.1 -0.3 +0.2 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.5 +0.2 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.1 +0.1 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 -0.3 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.4 -0.3 +0.1 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.0 +0.3 +0.6 +0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.6 -0.0 +0.0 -0.1 N.D.
growth on ypd YPD -0.1 +0.1 +0.3 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.6 +0.6 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +1.3 -0.1 -0.9 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.3 -0.0 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.8 -0.2 +0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.5 -0.3 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.0 +0.3 +0.4 N.D.
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