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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9869 and 9870 are separated by 603 nucleotides
9870 and 9871 are separated by 359 nucleotides
9871 and 9872 are separated by 164 nucleotides
9872 and 9873 are separated by 74 nucleotides
mRNA_1501: 9869 - Hypothetical Protein, at 459,271 to 459,744
9869
mRNA_1502: 9870 - HMMPfam-Fungal specific transcription factor domain-PF04082,SUPERFAMILY--SSF57701, at 460,348 to 464,473
9870
mRNA_1503: 9871 - Hypothetical Protein, at 464,833 to 466,128
9871
mRNA_1504: 9872 - K11251 H2A histone H2A, at 466,293 to 467,391
9872
mRNA_1505: 9873 - Hypothetical Protein, at 467,466 to 468,083
9873
Group
Condition
mRNA
_1501
mRNA
_1502
mRNA
_1503
mRNA
_1504
mRNA
_1505
9869
9870
9871
9872
9873
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
-1.1
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
-1.3
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.3
-0.8
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.0
-0.6
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.0
-0.6
N.D.
-0.2
auxotrophy
YNB Glucose
+0.1
-0.0
-0.7
N.D.
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.0
-0.3
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
-0.9
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
-0.0
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.1
N.D.
-0.5
auxotrophy
Dropout Complete
-0.0
-0.2
-0.2
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-0.4
N.D.
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.3
-0.2
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-0.4
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
+0.0
-0.1
-0.5
N.D.
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.0
-0.5
N.D.
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.2
-0.4
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.2
+0.2
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
-0.2
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
-0.1
N.D.
+0.0
growth on ypd
YPD
-0.1
-0.0
+0.6
N.D.
-0.3
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