Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9871 and 9872 are separated by 164 nucleotides9872 and 9873 are separated by 74 nucleotides9873 and 9874 are separated by 485 nucleotides9874 and 9875 are separated by 652 nucleotides mRNA_1503: 9871 - Hypothetical Protein, at 464,833 to 466,128 9871 mRNA_1504: 9872 - K11251 H2A histone H2A, at 466,293 to 467,391 9872 mRNA_1505: 9873 - Hypothetical Protein, at 467,466 to 468,083 9873 mRNA_1506: 9874 - Hypothetical Protein, at 468,569 to 469,292 9874 mRNA_1507: 9875 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 469,945 to 470,941 9875
Group Condition mRNA_1503 mRNA_1504 mRNA_1505 mRNA_1506 mRNA_1507
9871 9872 9873 9874 9875
auxotrophy YNB Glucose 75mM Methionine -1.1 N.D. -0.4 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.3 N.D. +0.1 N.D. -0.5
auxotrophy YNB Glucose -0.7 N.D. -0.4 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.8 N.D. -0.2 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. -0.2 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. -0.2 N.D. -0.2
auxotrophy Dropout Complete -0.2 N.D. -0.3 N.D. -0.4
growth on ricinoleic acid YNB Glucose -0.5 N.D. -0.0 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.0 N.D. -0.5 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.9 N.D. +0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.5 N.D. -0.1
growth on oleic acid YNB Glucose -0.2 N.D. -0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. -0.1 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.2 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. +0.0 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -0.3 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 N.D. +0.2 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.2 N.D. +0.0
growth on ypd YPD +0.6 N.D. -0.3 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.0 N.D. +0.4
remove
mRNA_1503
plot
remove
mRNA_1504
plot
remove
mRNA_1505
remove
mRNA_1506
plot
remove
mRNA_1507
plot