Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9875 and 9876 are separated by 359 nucleotides9876 and 9877 are separated by 535 nucleotides9877 and 9878 are separated by 757 nucleotides9878 and 9879 are separated by 91 nucleotides mRNA_1507: 9875 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 469,945 to 470,941 9875 mRNA_1508: 9876 - KOG3140 Predicted membrane protein, at 471,301 to 473,619 9876 mRNA_1509: 9877 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 474,155 to 475,425 9877 mRNA_1510: 9878 - KOG2695 WD40 repeat protein, at 476,183 to 478,334 9878 mRNA_1511: 9879 - KOG2136 Transcriptional regulators binding to the GC-rich sequences, at 478,426 to 481,591 9879
Group Condition mRNA_1507 mRNA_1508 mRNA_1509 mRNA_1510 mRNA_1511
9875 9876 9877 9878 9879
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -0.1 -0.2 -1.2
growth on oleic acid YNB Glucose -0.3 -0.6 -0.4 +0.5 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.3 -0.1 -0.6 -0.2
growth on oleic acid YNB Oleic Acid -0.2 -0.4 -0.1 +0.5 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.6 +0.1 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.6 -0.4 -0.2 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 -0.4 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 +0.9 -0.3 -0.6 +0.0
growth on ypd YPD -0.1 -1.3 +0.1 +0.0 +0.9
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.3 -0.0 +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 +0.2 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.9 -0.5 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.6 -0.7 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.9 -0.2 +0.1 -0.7
growth on ricinoleic acid YNB Glucose -0.3 +0.4 -0.2 +0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.5 +0.3 -0.6 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.7 +0.1 +0.3 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.4 -0.1 +0.3 +1.0
auxotrophy Dropout Complete -0.4 +0.1 +0.2 +0.8 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.5 +0.1 -0.1 +0.7
auxotrophy YNB Glucose -0.4 +0.5 +0.1 +0.5 +0.7
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