Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9878 and 9879 are separated by 91 nucleotides9879 and 9880 are separated by 219 nucleotides9880 and 9881 are separated by 145 nucleotides9881 and 9882 are separated by 104 nucleotides mRNA_1510: 9878 - KOG2695 WD40 repeat protein, at 476,183 to 478,334 9878 mRNA_1511: 9879 - KOG2136 Transcriptional regulators binding to the GC-rich sequences, at 478,426 to 481,591 9879 mRNA_1512: 9880 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 481,811 to 485,314 9880 mRNA_1513: 9881 - K13280 SEC11, sipW signal peptidase, endoplasmic reticulum-type, at 485,460 to 486,499 9881 mRNA_1514: 9882 - K07050 AARSD1, ALAX misacylated tRNA(Ala) deacylase, at 486,604 to 488,267 9882
Group Condition mRNA_1510 mRNA_1511 mRNA_1512 mRNA_1513 mRNA_1514
9878 9879 9880 9881 9882
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -1.2 -0.2 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.0 -0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.6 -0.3 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.2 +0.0 N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.7 +0.2 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.2 +0.1 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.5 -0.7 -0.0 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.0 -0.2 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 +0.1 N.D. +0.2
growth on oleic acid YNB Glucose +0.5 -0.4 -0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.1 +0.0 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.2 +0.1 N.D. +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 +0.0 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.4 +0.1 N.D. -0.2
growth on ricinoleic acid YNB Glucose +0.4 +0.2 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 -0.1 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.7 +0.0 N.D. +0.0
growth on ypd YPD +0.0 +0.9 -0.1 N.D. +0.1
auxotrophy YNB Glucose +0.5 +0.7 +0.1 N.D. -0.3
auxotrophy Dropout Complete +0.8 +0.5 +0.1 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +1.0 +0.1 N.D. -0.1
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