Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9879 and 9880 are separated by 219 nucleotides
9880 and 9881 are separated by 145 nucleotides
9881 and 9882 are separated by 104 nucleotides
9882 and 9883 are separated by 178 nucleotides
mRNA_1511: 9879 - KOG2136 Transcriptional regulators binding to the GC-rich sequences, at 478,426 to 481,591
9879
mRNA_1512: 9880 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 481,811 to 485,314
9880
mRNA_1513: 9881 - K13280 SEC11, sipW signal peptidase, endoplasmic reticulum-type, at 485,460 to 486,499
9881
mRNA_1514: 9882 - K07050 AARSD1, ALAX misacylated tRNA(Ala) deacylase, at 486,604 to 488,267
9882
mRNA_1515: 9883 - HMMPfam-Up-regulated During Septation-PF15456,SUPERFAMILY--SSF57997, at 488,446 to 491,742
9883
Group
Condition
mRNA
_1511
mRNA
_1512
mRNA
_1513
mRNA
_1514
mRNA
_1515
9879
9880
9881
9882
9883
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.2
N.D.
-0.1
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.3
N.D.
+0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.2
-0.2
N.D.
-0.3
+0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.4
N.D.
-0.1
-0.2
growth on oleic acid
YNB Glucose
-0.4
-0.1
N.D.
-0.1
+0.4
growth on oleic acid
YNB Oleic Acid
-0.7
-0.0
N.D.
+0.0
+0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
N.D.
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.0
N.D.
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.0
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.1
N.D.
+0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.1
N.D.
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.0
N.D.
+0.2
+0.4
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
N.D.
-0.1
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.1
N.D.
-0.2
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.1
N.D.
+0.4
+0.1
growth on ypd
YPD
+0.9
-0.1
N.D.
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.2
N.D.
+0.1
+0.8
auxotrophy
Dropout Complete
+0.5
+0.1
N.D.
-0.2
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.7
+0.0
N.D.
+0.0
+0.3
auxotrophy
YNB Glucose
+0.7
+0.1
N.D.
-0.3
+0.6
auxotrophy
YNB Glucose 75mM Arginine
+1.0
+0.1
N.D.
-0.1
+0.6
remove
mRNA_1511
plot
remove
mRNA_1512
plot
remove
mRNA_1513
remove
mRNA_1514
plot
remove
mRNA_1515
plot