Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9881 and 9882 are separated by 104 nucleotides9882 and 9883 are separated by 178 nucleotides9883 and 9884 are separated by 405 nucleotides9884 and 9885 are separated by 882 nucleotides mRNA_1513: 9881 - K13280 SEC11, sipW signal peptidase, endoplasmic reticulum-type, at 485,460 to 486,499 9881 mRNA_1514: 9882 - K07050 AARSD1, ALAX misacylated tRNA(Ala) deacylase, at 486,604 to 488,267 9882 mRNA_1515: 9883 - HMMPfam-Up-regulated During Septation-PF15456,SUPERFAMILY--SSF57997, at 488,446 to 491,742 9883 mRNA_1516: 9884 - BLAST transmembrane ATP-binding protein ABC transporter [Rh..., at 492,148 to 493,899 9884 mRNA_1517: 9885 - HMMPfam-Alternative oxidase-PF01786,PIRSF--PIRSF005229, at 494,782 to 496,298 9885
Group Condition mRNA_1513 mRNA_1514 mRNA_1515 mRNA_1516 mRNA_1517
9881 9882 9883 9884 9885
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.8 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.2 N.D. -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.0 +0.6 N.D. -0.6
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 +0.3 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.9 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 -0.0 N.D. +0.1
growth on oleic acid YNB Glucose N.D. -0.1 +0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 -0.0 N.D. -0.1
growth on ypd YPD N.D. +0.1 -0.2 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.0 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.5 N.D. +0.1
auxotrophy Dropout Complete N.D. -0.2 +0.4 N.D. +0.2
auxotrophy YNB Glucose N.D. -0.3 +0.6 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 +0.3 N.D. +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.5 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.8 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 +0.1 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.6 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.4 N.D. +0.3
remove
mRNA_1513
plot
remove
mRNA_1514
plot
remove
mRNA_1515
remove
mRNA_1516
plot
remove
mRNA_1517
plot