Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9883 and 9884 are separated by 405 nucleotides9884 and 9885 are separated by 882 nucleotides9885 and 9886 are separated by 624 nucleotides9886 and 9887 are separated by 458 nucleotides mRNA_1515: 9883 - HMMPfam-Up-regulated During Septation-PF15456,SUPERFAMILY--SSF57997, at 488,446 to 491,742 9883 mRNA_1516: 9884 - BLAST transmembrane ATP-binding protein ABC transporter [Rh..., at 492,148 to 493,899 9884 mRNA_1517: 9885 - HMMPfam-Alternative oxidase-PF01786,PIRSF--PIRSF005229, at 494,782 to 496,298 9885 mRNA_1518: 9886 - K03521 fixA, etfB electron transfer flavoprotein beta subunit, at 496,923 to 498,027 9886 mRNA_1519: 9887 - K03434 PIGL N-acetylglucosaminylphosphatidylinositol deacetylase, at 498,486 to 499,593 9887
Group Condition mRNA_1515 mRNA_1516 mRNA_1517 mRNA_1518 mRNA_1519
9883 9884 9885 9886 9887
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.1 -2.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.1 -1.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.1 -1.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 N.D. -0.3 -2.4 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 N.D. -0.4 +0.6 -0.2
growth on oleic acid YNB Oleic Acid +0.6 N.D. -0.6 -1.6 +0.8
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. +0.3 -0.9 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.0 -1.2 +0.5
growth on oleic acid YNB Glucose +0.4 N.D. -0.1 -1.2 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.2 -0.9 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.9 N.D. -0.4 -1.7 +0.9
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. +0.3 -1.3 +0.2
growth on ypd YPD -0.2 N.D. +0.3 -0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.1 -0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.5 N.D. +0.2 -0.7 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.5 N.D. +0.1 -0.0 +0.1
auxotrophy Dropout Complete +0.4 N.D. +0.2 +0.6 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. -0.2 +0.9 +0.5
auxotrophy YNB Glucose +0.6 N.D. +0.1 +0.7 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.6 N.D. +0.3 +0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. +0.3 +0.4 +0.9
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