Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9885 and 9886 are separated by 624 nucleotides9886 and 9887 are separated by 458 nucleotides9887 and 9888 are separated by 316 nucleotides9888 and 9889 are separated by 269 nucleotides mRNA_1517: 9885 - HMMPfam-Alternative oxidase-PF01786,PIRSF--PIRSF005229, at 494,782 to 496,298 9885 mRNA_1518: 9886 - K03521 fixA, etfB electron transfer flavoprotein beta subunit, at 496,923 to 498,027 9886 mRNA_1519: 9887 - K03434 PIGL N-acetylglucosaminylphosphatidylinositol deacetylase, at 498,486 to 499,593 9887 mRNA_1520: 9888 - K00765 hisG ATP phosphoribosyltransferase, at 499,910 to 501,221 9888 mRNA_1521: 9889 - HMMPfam-DNA polymerase delta, subunit 4-PF04081, at 501,491 to 502,163 9889
Group Condition mRNA_1517 mRNA_1518 mRNA_1519 mRNA_1520 mRNA_1521
9885 9886 9887 9888 9889
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -2.4 +0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -2.0 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -1.5 +0.0 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.6 -1.6 +0.8 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -1.7 +0.9 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -1.2 -0.1 N.D. N.D.
growth on oleic acid YNB Glucose -0.1 -1.2 +0.4 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -1.3 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -1.2 +0.5 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.9 -0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.9 +0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.6 -0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 -0.7 +0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.1 N.D. N.D.
growth on ypd YPD +0.3 -0.0 +0.0 N.D. N.D.
auxotrophy Dropout Complete +0.2 +0.6 -0.0 N.D. N.D.
auxotrophy YNB Glucose +0.1 +0.7 +0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 +0.4 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.9 +0.5 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.4 +0.9 N.D. N.D.
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