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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9889 and 9890 are separated by 662 nucleotides
9890 and 9891 are separated by 146 nucleotides
9891 and 9892 are separated by 234 nucleotides
9892 and 9893 are separated by 133 nucleotides
mRNA_1521: 9889 - HMMPfam-DNA polymerase delta, subunit 4-PF04081, at 501,491 to 502,163
9889
mRNA_1522: 9890 - K06685 MOB1, Mats MOB kinase activator 1, at 502,826 to 504,110
9890
mRNA_1523: 9891 - Hypothetical Protein, at 504,257 to 504,927
9891
mRNA_1524: 9892 - K07178 RIOK1 RIO kinase 1, at 505,162 to 507,225
9892
mRNA_1525: 9893 - K08267 RICTOR rapamycin-insensitive companion of mTOR, at 507,359 to 512,878
9893
Group
Condition
mRNA
_1521
mRNA
_1522
mRNA
_1523
mRNA
_1524
mRNA
_1525
9889
9890
9891
9892
9893
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-2.0
-0.4
N.D.
N.D.
growth on ypd
YPD
N.D.
-0.3
-0.5
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
-0.5
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
-0.4
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
+0.1
N.D.
N.D.
growth on oleic acid
YNB Glucose
N.D.
+0.1
-0.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
+0.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.5
-0.4
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.4
-0.3
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
-0.0
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
+0.0
N.D.
N.D.
auxotrophy
Dropout Complete
N.D.
-0.0
+0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.5
-0.3
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
+0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.4
-0.1
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
+0.0
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.4
+0.0
N.D.
N.D.
auxotrophy
YNB Glucose
N.D.
+0.3
+0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.5
+0.3
N.D.
N.D.
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