Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9900 and 9901 are separated by 200 nucleotides9901 and 9902 are separated by 214 nucleotides9902 and 9903 are separated by 459 nucleotides9903 and 9904 are separated by 120 nucleotides mRNA_1532: 9900 - K00766 trpD anthranilate phosphoribosyltransferase, at 527,155 to 528,581 9900 mRNA_1533: 9901 - K04649 HIP2, UBC1 ubiquitin-conjugating enzyme (huntingtin interacting protein 2), at 528,782 to 530,057 9901 mRNA_1534: 9902 - K12493 ARFGAP2_3 ADP-ribosylation factor GTPase-activating protein 2/3, at 530,272 to 532,362 9902 mRNA_1535: 9903 - K12471 EPN epsin, at 532,822 to 534,645 9903 mRNA_1536: 9904 - K19783 HCS1 DNA polymerase alpha-associated DNA helicase A, at 534,766 to 537,382 9904
Group Condition mRNA_1532 mRNA_1533 mRNA_1534 mRNA_1535 mRNA_1536
9900 9901 9902 9903 9904
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.9 -0.5 -0.6 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.9 -0.0 +0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. -0.6 +0.1 -0.5 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.5 +0.0 -1.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.7 -0.2 +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.9 +0.5 -0.2 +0.4
auxotrophy YNB Glucose N.D. -0.6 +0.5 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.6 +0.3 +0.3 +0.0
growth on ypd YPD N.D. -0.2 -0.3 +0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.2 -0.0 +0.2
growth on oleic acid YNB Glucose N.D. -0.6 +0.6 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +0.4 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 +0.5 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.4 -0.3 +0.2 +0.4
growth on ricinoleic acid YNB Glucose N.D. -0.4 +0.7 +0.3 +0.0
growth on oleic acid YNB Oleic Acid N.D. -0.9 +1.7 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 +0.6 +0.0 +0.5
auxotrophy Dropout Complete N.D. -0.3 +0.8 +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.7 +0.6 +0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 +1.7 +0.6 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.0 +2.1 +0.5 +0.1
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