Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9903 and 9904 are separated by 120 nucleotides9904 and 9905 are separated by 337 nucleotides9905 and 9906 are separated by 254 nucleotides9906 and 9907 are separated by 79 nucleotides mRNA_1535: 9903 - K12471 EPN epsin, at 532,822 to 534,645 9903 mRNA_1536: 9904 - K19783 HCS1 DNA polymerase alpha-associated DNA helicase A, at 534,766 to 537,382 9904 mRNA_1537: 9905 - K05284 PIGM phosphatidylinositol glycan, class M, at 537,720 to 539,172 9905 mRNA_1538: 9906 - K20307 TRAPPC10, TRS130 trafficking protein particle complex subunit 10, at 539,427 to 544,024 9906 mRNA_1539: 9907 - K13617 PPME1 protein phosphatase methylesterase 1, at 544,104 to 545,858 9907
Group Condition mRNA_1535 mRNA_1536 mRNA_1537 mRNA_1538 mRNA_1539
9903 9904 9905 9906 9907
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.5 N.D. -1.4 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.0 N.D. -0.6 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.1 N.D. -0.5 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.2 N.D. -0.1 +0.6
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.2 N.D. +0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 N.D. +0.5 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.1 N.D. -0.0 +0.0
growth on oleic acid YNB Glucose -0.3 +0.3 N.D. +0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.3 N.D. +0.7 -0.0
growth on oleic acid YNB Oleic Acid -0.3 +0.2 N.D. +0.7 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.9 -0.2
growth on ricinoleic acid YNB Glucose +0.3 +0.0 N.D. +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 N.D. +0.6 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.5 N.D. +0.9 +0.1
growth on ypd YPD +0.6 -0.1 N.D. +1.1 +0.2
auxotrophy YNB Glucose -0.0 -0.2 N.D. +1.6 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.1 N.D. +1.3 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 N.D. +1.6 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.2 N.D. +1.8 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.0 N.D. +1.5 +0.3
auxotrophy Dropout Complete +0.2 +0.0 N.D. +1.9 -0.0
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