Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9904 and 9905 are separated by 337 nucleotides9905 and 9906 are separated by 254 nucleotides9906 and 9907 are separated by 79 nucleotides9907 and 9908 are separated by 263 nucleotides mRNA_1536: 9904 - K19783 HCS1 DNA polymerase alpha-associated DNA helicase A, at 534,766 to 537,382 9904 mRNA_1537: 9905 - K05284 PIGM phosphatidylinositol glycan, class M, at 537,720 to 539,172 9905 mRNA_1538: 9906 - K20307 TRAPPC10, TRS130 trafficking protein particle complex subunit 10, at 539,427 to 544,024 9906 mRNA_1539: 9907 - K13617 PPME1 protein phosphatase methylesterase 1, at 544,104 to 545,858 9907 mRNA_1540: 9908 - K02870 RP-L12e, RPL12 large subunit ribosomal protein L12e, at 546,122 to 547,305 9908
Group Condition mRNA_1536 mRNA_1537 mRNA_1538 mRNA_1539 mRNA_1540
9904 9905 9906 9907 9908
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. -1.4 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. -0.6 +0.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -0.5 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.0 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -0.1 +0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. +0.7 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.5 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.2 +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.4 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.9 -0.2 N.D.
growth on oleic acid YNB Glucose +0.3 N.D. +0.3 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. +0.6 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.7 +0.2 N.D.
growth on ypd YPD -0.1 N.D. +1.1 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +1.3 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +1.8 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 N.D. +0.9 +0.1 N.D.
auxotrophy YNB Glucose -0.2 N.D. +1.6 +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. +1.5 +0.3 N.D.
auxotrophy Dropout Complete +0.0 N.D. +1.9 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +1.6 +0.1 N.D.
remove
mRNA_1536
plot
remove
mRNA_1537
plot
remove
mRNA_1538
remove
mRNA_1539
plot
remove
mRNA_1540
plot