Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9908 and 9909 are separated by 1782 nucleotides9909 and 9910 are separated by 456 nucleotides9910 and 9911 are separated by 514 nucleotides9911 and 9912 are separated by 1478 nucleotides mRNA_1540: 9908 - K02870 RP-L12e, RPL12 large subunit ribosomal protein L12e, at 546,122 to 547,305 9908 mRNA_1541: 9909 - K14753 RACK1 guanine nucleotide-binding protein subunit beta-2-like 1 protein, at 549,088 to 551,017 9909 mRNA_1542: 9910 - K01834 PGAM, gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, at 551,474 to 552,455 9910 mRNA_1543: 9911 - Hypothetical Protein, at 552,970 to 553,858 9911 mRNA_1544: 9912 - K08745 SLC27A1_4, FATP1, FATP4 solute carrier family 27 (fatty acid transporter), member 1/4, at 555,337 to 558,196 9912
Group Condition mRNA_1540 mRNA_1541 mRNA_1542 mRNA_1543 mRNA_1544
9908 9909 9910 9911 9912
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. -1.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.6 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -0.9 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. -0.9 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. -0.4 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.1 -0.1
auxotrophy YNB Glucose N.D. N.D. N.D. +0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. +0.6 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. +0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. +0.2 -0.0
auxotrophy Dropout Complete N.D. N.D. N.D. +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. +0.3 +0.1
growth on oleic acid YNB Glucose N.D. N.D. N.D. +0.4 -0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. +0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. +0.5 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. +0.7 -0.1
growth on ypd YPD N.D. N.D. N.D. +0.7 -0.0
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. +1.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. +1.0 +0.3
remove
mRNA_1540
plot
remove
mRNA_1541
plot
remove
mRNA_1542
remove
mRNA_1543
plot
remove
mRNA_1544
plot