Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9909 and 9910 are separated by 456 nucleotides9910 and 9911 are separated by 514 nucleotides9911 and 9912 are separated by 1478 nucleotides9912 and 9913 are separated by 219 nucleotides mRNA_1541: 9909 - K14753 RACK1 guanine nucleotide-binding protein subunit beta-2-like 1 protein, at 549,088 to 551,017 9909 mRNA_1542: 9910 - K01834 PGAM, gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, at 551,474 to 552,455 9910 mRNA_1543: 9911 - Hypothetical Protein, at 552,970 to 553,858 9911 mRNA_1544: 9912 - K08745 SLC27A1_4, FATP1, FATP4 solute carrier family 27 (fatty acid transporter), member 1/4, at 555,337 to 558,196 9912 mRNA_1545: 9913 - Hypothetical Protein, at 558,416 to 558,832 9913
Group Condition mRNA_1541 mRNA_1542 mRNA_1543 mRNA_1544 mRNA_1545
9909 9910 9911 9912 9913
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.6 -0.3 -0.6
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -1.1 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.9 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.9 +0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.4 +0.0 -0.1
auxotrophy YNB Glucose N.D. N.D. +0.4 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.1 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.4 -0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.3 +0.1 -0.1
auxotrophy Dropout Complete N.D. N.D. +0.3 -0.1 +0.0
growth on ypd YPD N.D. N.D. +0.7 -0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.5 +0.0 -0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.3 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.6 -0.5 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.7 -0.1 -0.1
growth on oleic acid YNB Glucose N.D. N.D. +0.4 -0.0 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +1.0 +0.3 -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. +1.2 -0.1 +0.2
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