Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9913 and 9914 are separated by 485 nucleotides
9914 and 9915 are separated by 103 nucleotides
9915 and 9916 are separated by 531 nucleotides
9916 and 9917 are separated by 854 nucleotides
mRNA_1545: 9913 - Hypothetical Protein, at 558,416 to 558,832
9913
mRNA_1546: 9914 - K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23, at 559,318 to 562,481
9914
mRNA_1547: 9915 - K14402 CPSF2, CFT2 cleavage and polyadenylation specificity factor subunit 2, at 562,585 to 566,021
9915
mRNA_1548: 9916 - K07937 ARF1 ADP-ribosylation factor 1, at 566,553 to 567,814
9916
mRNA_1549: 9917 - BLAST putative TspO/MBR family containing protein [Rhizocto..., at 568,669 to 569,316
9917
Group
Condition
mRNA
_1545
mRNA
_1546
mRNA
_1547
mRNA
_1548
mRNA
_1549
9913
9914
9915
9916
9917
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-1.9
-0.7
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-1.9
-0.5
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-2.1
-0.4
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+1.4
-2.2
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-1.1
+0.0
N.D.
+0.4
growth on oleic acid
YNB Oleic Acid
+0.2
-1.5
+0.5
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
+0.0
-0.8
-0.1
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.6
+0.0
N.D.
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
-0.3
N.D.
+0.2
auxotrophy
Dropout Complete
+0.0
-0.4
+0.1
N.D.
+0.1
auxotrophy
YNB Glucose
-0.1
-1.1
+0.6
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-1.1
+0.6
N.D.
+0.3
growth on ypd
YPD
-0.3
-0.0
+0.8
N.D.
-0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.9
+0.5
N.D.
+0.5
growth on oleic acid
YNB Glucose
+0.3
-1.0
+0.7
N.D.
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.3
+0.1
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.6
-0.0
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.1
+0.1
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.3
+0.7
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.5
+0.9
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+1.0
+0.3
N.D.
+0.0
remove
mRNA_1545
plot
remove
mRNA_1546
plot
remove
mRNA_1547
remove
mRNA_1548
plot
remove
mRNA_1549
plot