Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9913 and 9914 are separated by 485 nucleotides9914 and 9915 are separated by 103 nucleotides9915 and 9916 are separated by 531 nucleotides9916 and 9917 are separated by 854 nucleotides mRNA_1545: 9913 - Hypothetical Protein, at 558,416 to 558,832 9913 mRNA_1546: 9914 - K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23, at 559,318 to 562,481 9914 mRNA_1547: 9915 - K14402 CPSF2, CFT2 cleavage and polyadenylation specificity factor subunit 2, at 562,585 to 566,021 9915 mRNA_1548: 9916 - K07937 ARF1 ADP-ribosylation factor 1, at 566,553 to 567,814 9916 mRNA_1549: 9917 - BLAST putative TspO/MBR family containing protein [Rhizocto..., at 568,669 to 569,316 9917
Group Condition mRNA_1545 mRNA_1546 mRNA_1547 mRNA_1548 mRNA_1549
9913 9914 9915 9916 9917
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.9 -0.7 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -1.9 -0.5 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -2.1 -0.4 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +1.4 -2.2 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -1.1 +0.0 N.D. +0.4
growth on oleic acid YNB Oleic Acid +0.2 -1.5 +0.5 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.0 -0.8 -0.1 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.6 +0.0 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.3 -0.3 N.D. +0.2
auxotrophy Dropout Complete +0.0 -0.4 +0.1 N.D. +0.1
auxotrophy YNB Glucose -0.1 -1.1 +0.6 N.D. +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -1.1 +0.6 N.D. +0.3
growth on ypd YPD -0.3 -0.0 +0.8 N.D. -0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.9 +0.5 N.D. +0.5
growth on oleic acid YNB Glucose +0.3 -1.0 +0.7 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.3 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.6 -0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 +0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 +0.7 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.5 +0.9 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +1.0 +0.3 N.D. +0.0
remove
mRNA_1545
plot
remove
mRNA_1546
plot
remove
mRNA_1547
remove
mRNA_1548
plot
remove
mRNA_1549
plot