Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9914 and 9915 are separated by 103 nucleotides9915 and 9916 are separated by 531 nucleotides9916 and 9917 are separated by 854 nucleotides9917 and 9918 are separated by 58 nucleotides mRNA_1546: 9914 - K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23, at 559,318 to 562,481 9914 mRNA_1547: 9915 - K14402 CPSF2, CFT2 cleavage and polyadenylation specificity factor subunit 2, at 562,585 to 566,021 9915 mRNA_1548: 9916 - K07937 ARF1 ADP-ribosylation factor 1, at 566,553 to 567,814 9916 mRNA_1549: 9917 - BLAST putative TspO/MBR family containing protein [Rhizocto..., at 568,669 to 569,316 9917 mRNA_1550: 9918 - HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335, at 569,375 to 570,862 9918
Group Condition mRNA_1546 mRNA_1547 mRNA_1548 mRNA_1549 mRNA_1550
9914 9915 9916 9917 9918
facs on lipid accumulation Sorted No BODIPY Gate -1.9 -0.7 N.D. -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -2.1 -0.4 N.D. -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 -0.5 N.D. -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -1.1 +0.0 N.D. +0.4 -0.5
growth on oleic acid YNB Oleic Acid -1.5 +0.5 N.D. +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.0 N.D. +0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +1.4 -2.2 N.D. -0.4 +0.4
auxotrophy YNB Glucose -1.1 +0.6 N.D. +0.5 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 N.D. -0.0 -0.7
auxotrophy Dropout Complete -0.4 +0.1 N.D. +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.9 +0.5 N.D. +0.5 -0.4
growth on ricinoleic acid YNB Glucose -0.8 -0.1 N.D. +0.2 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 N.D. +0.2 +0.3
growth on oleic acid YNB Glucose -1.0 +0.7 N.D. +0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.9 N.D. +0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.1 +0.6 N.D. +0.3 +0.4
growth on ypd YPD -0.0 +0.8 N.D. -0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.1 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.7 N.D. +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.6 -0.0 N.D. -0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy +1.0 +0.3 N.D. +0.0 +0.2
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