Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9916 and 9917 are separated by 854 nucleotides9917 and 9918 are separated by 58 nucleotides9918 and 9919 are separated by 1069 nucleotides9919 and 9920 are separated by 385 nucleotides mRNA_1548: 9916 - K07937 ARF1 ADP-ribosylation factor 1, at 566,553 to 567,814 9916 mRNA_1549: 9917 - BLAST putative TspO/MBR family containing protein [Rhizocto..., at 568,669 to 569,316 9917 mRNA_1550: 9918 - HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335, at 569,375 to 570,862 9918 mRNA_1551: 9919 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 571,932 to 573,047 9919 mRNA_1552: 9920 - K03115 CSNK2B casein kinase II subunit beta, at 573,433 to 575,580 9920
Group Condition mRNA_1548 mRNA_1549 mRNA_1550 mRNA_1551 mRNA_1552
9916 9917 9918 9919 9920
growth on ypd YPD N.D. -0.6 +0.1 -0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.5 -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 -0.3 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.7 +0.1 -0.1
auxotrophy YNB Glucose N.D. +0.5 -0.6 -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 -0.4 -0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 -0.5 -0.3 -0.2
auxotrophy Dropout Complete N.D. +0.1 -0.2 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 +0.2 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 -0.5 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 +0.4 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.1 +0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.2 -0.0 -0.1
growth on oleic acid YNB Glucose N.D. +0.2 +0.0 -0.3 -0.0
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.1 -0.5 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 +0.3 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 +0.4 -0.2 +0.0
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.5 -0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 +0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.4 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.1 +0.1 +0.4
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