Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9917 and 9918 are separated by 58 nucleotides
9918 and 9919 are separated by 1069 nucleotides
9919 and 9920 are separated by 385 nucleotides
9920 and 9921 are separated by 104 nucleotides
mRNA_1549: 9917 - BLAST putative TspO/MBR family containing protein [Rhizocto..., at 568,669 to 569,316
9917
mRNA_1550: 9918 - HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335, at 569,375 to 570,862
9918
mRNA_1551: 9919 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 571,932 to 573,047
9919
mRNA_1552: 9920 - K03115 CSNK2B casein kinase II subunit beta, at 573,433 to 575,580
9920
mRNA_1553: 9921 - KOG1729 FYVE finger containing protein, at 575,685 to 583,746
9921
Group
Condition
mRNA
_1549
mRNA
_1550
mRNA
_1551
mRNA
_1552
mRNA
_1553
9917
9918
9919
9920
9921
growth on ypd
YPD
-0.6
+0.1
-0.0
-0.4
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.3
-0.3
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.5
-0.2
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.5
-0.3
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.7
+0.1
-0.1
-0.0
auxotrophy
YNB Glucose
+0.5
-0.6
-0.1
-0.4
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
-0.1
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.5
-0.4
-0.1
-0.5
-0.0
auxotrophy
Dropout Complete
+0.1
-0.2
-0.2
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.5
+0.2
-0.1
-0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
-0.5
+0.5
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.4
-0.1
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.4
-0.2
+0.0
-0.1
growth on oleic acid
YNB Glucose
+0.2
+0.0
-0.3
-0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
-0.0
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.3
-0.2
-0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.2
-0.1
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
+0.2
+0.5
-0.2
-0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.1
+0.3
-0.4
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.1
+0.1
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.4
-0.1
+0.1
+0.1
remove
mRNA_1549
plot
remove
mRNA_1550
plot
remove
mRNA_1551
remove
mRNA_1552
plot
remove
mRNA_1553
plot