Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9918 and 9919 are separated by 1069 nucleotides9919 and 9920 are separated by 385 nucleotides9920 and 9921 are separated by 104 nucleotides9921 and 9922 are separated by 84 nucleotides mRNA_1550: 9918 - HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335, at 569,375 to 570,862 9918 mRNA_1551: 9919 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 571,932 to 573,047 9919 mRNA_1552: 9920 - K03115 CSNK2B casein kinase II subunit beta, at 573,433 to 575,580 9920 mRNA_1553: 9921 - KOG1729 FYVE finger containing protein, at 575,685 to 583,746 9921 mRNA_1554: 9922 - KOG1611 Predicted short chain-type dehydrogenase, at 583,831 to 584,732 9922
Group Condition mRNA_1550 mRNA_1551 mRNA_1552 mRNA_1553 mRNA_1554
9918 9919 9920 9921 9922
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.3 -0.2 -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1 -0.5 -0.0 -0.0
auxotrophy YNB Glucose -0.6 -0.1 -0.4 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.2 -0.0 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.4 -0.2 -0.2
auxotrophy Dropout Complete -0.2 -0.2 -0.3 -0.0 -0.2
growth on ypd YPD +0.1 -0.0 -0.4 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.2 -0.1 -0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.5 +0.5 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.2 +0.0 -0.1 -0.7
growth on oleic acid YNB Glucose +0.0 -0.3 -0.0 +0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 +0.2 -0.1 -0.6
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 -0.1 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.1 -0.1 -0.0 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.1 -0.1 +0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.3 -0.2 -0.1 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.2 -0.2 +0.1 +0.4
growth on ricinoleic acid YNB Glucose +0.5 -0.2 -0.4 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.1 +0.1 +0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.3 -0.4 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 +0.4 -0.0 +0.4
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