Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9919 and 9920 are separated by 385 nucleotides9920 and 9921 are separated by 104 nucleotides9921 and 9922 are separated by 84 nucleotides9922 and 9923 are separated by 328 nucleotides mRNA_1551: 9919 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 571,932 to 573,047 9919 mRNA_1552: 9920 - K03115 CSNK2B casein kinase II subunit beta, at 573,433 to 575,580 9920 mRNA_1553: 9921 - KOG1729 FYVE finger containing protein, at 575,685 to 583,746 9921 mRNA_1554: 9922 - KOG1611 Predicted short chain-type dehydrogenase, at 583,831 to 584,732 9922 mRNA_1555: 9923 - K18703 SUGCT succinate---hydroxymethylglutarate CoA-transferase, at 585,061 to 586,995 9923
Group Condition mRNA_1551 mRNA_1552 mRNA_1553 mRNA_1554 mRNA_1555
9919 9920 9921 9922 9923
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 -0.1 -0.7 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2 -0.2 -0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.4 -0.2 -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 -0.1 -0.6 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.0 -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.5 -0.0 -0.0 +0.2
growth on oleic acid YNB Oleic Acid -0.5 +0.5 -0.2 -0.3 -0.0
growth on oleic acid YNB Glucose -0.3 -0.0 +0.0 -0.3 +0.2
auxotrophy Dropout Complete -0.2 -0.3 -0.0 -0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 +0.1 -0.4 +0.2
growth on ypd YPD -0.0 -0.4 -0.0 -0.3 +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.1 -0.4 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 -0.0 -0.1 +0.0
auxotrophy YNB Glucose -0.1 -0.4 -0.0 +0.1 +0.4
growth on ricinoleic acid YNB Glucose -0.2 -0.4 +0.1 +0.4 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.2 -0.1 +0.8 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 +0.1 +0.4 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.1 +0.1 +0.3 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.4 +0.6 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 -0.0 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.4 -0.0 +0.4 +0.2
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