Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9921 and 9922 are separated by 84 nucleotides9922 and 9923 are separated by 328 nucleotides9923 and 9924 are separated by 84 nucleotides9924 and 9925 are separated by 172 nucleotides mRNA_1553: 9921 - KOG1729 FYVE finger containing protein, at 575,685 to 583,746 9921 mRNA_1554: 9922 - KOG1611 Predicted short chain-type dehydrogenase, at 583,831 to 584,732 9922 mRNA_1555: 9923 - K18703 SUGCT succinate---hydroxymethylglutarate CoA-transferase, at 585,061 to 586,995 9923 mRNA_1556: 9924 - KOG3114 Uncharacterized conserved protein, at 587,080 to 588,305 9924 mRNA_1557: 9925 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 588,478 to 590,403 9925
Group Condition mRNA_1553 mRNA_1554 mRNA_1555 mRNA_1556 mRNA_1557
9921 9922 9923 9924 9925
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.4 +0.2 -0.1 -2.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 -0.1 -0.3 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.6 -0.1 -0.7 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.7 -0.1 +0.2 -0.0
growth on oleic acid YNB Glucose +0.0 -0.3 +0.2 -0.1 -0.4
growth on oleic acid YNB Oleic Acid -0.2 -0.3 -0.0 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.4 +0.4 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 +0.2 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 +0.0 +0.5 -0.1
growth on ypd YPD -0.0 -0.3 +0.5 +0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.1 +0.0 +0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 +0.2 +0.6 -0.2
auxotrophy Dropout Complete -0.0 -0.2 +0.2 +0.2 +0.4
growth on ricinoleic acid YNB Glucose +0.1 +0.4 +0.1 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.4 +0.2 +0.5 -0.3
auxotrophy YNB Glucose -0.0 +0.1 +0.4 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 +0.2 +1.0 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.8 +0.1 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.3 +0.2 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.5 +0.2 +0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.4 +0.4 +0.4 +0.0
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