Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9923 and 9924 are separated by 84 nucleotides9924 and 9925 are separated by 172 nucleotides9925 and 9926 are separated by 263 nucleotides9926 and 9927 are separated by 608 nucleotides mRNA_1555: 9923 - K18703 SUGCT succinate---hydroxymethylglutarate CoA-transferase, at 585,061 to 586,995 9923 mRNA_1556: 9924 - KOG3114 Uncharacterized conserved protein, at 587,080 to 588,305 9924 mRNA_1557: 9925 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 588,478 to 590,403 9925 mRNA_1558: 9926 - KOG4155 FOG WD40 repeat, at 590,667 to 593,724 9926 mRNA_1559: 9927 - Hypothetical Protein, at 594,333 to 596,246 9927
Group Condition mRNA_1555 mRNA_1556 mRNA_1557 mRNA_1558 mRNA_1559
9923 9924 9925 9926 9927
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3 -0.5 -1.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 -2.0 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.2 -0.5 -0.7 N.D.
growth on oleic acid YNB Glucose +0.2 -0.1 -0.4 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 +0.4 -0.8 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.7 +0.3 +0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.2 +0.3 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.6 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.5 -0.3 +0.2 N.D.
auxotrophy YNB Glucose +0.4 +0.2 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 +0.1 +0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.0 -0.1 +0.1 +0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.2 -0.2 +0.7 N.D.
growth on ypd YPD +0.5 +0.1 +0.3 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 -0.0 +0.7 N.D.
auxotrophy Dropout Complete +0.2 +0.2 +0.4 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.5 -0.1 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.4 +0.0 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +1.0 +0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.6 +0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 +0.1 +0.9 N.D.
remove
mRNA_1555
plot
remove
mRNA_1556
plot
remove
mRNA_1557
remove
mRNA_1558
plot
remove
mRNA_1559
plot