Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9925 and 9926 are separated by 263 nucleotides9926 and 9927 are separated by 608 nucleotides9927 and 9928 are separated by 196 nucleotides9928 and 9929 are separated by 360 nucleotides mRNA_1557: 9925 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 588,478 to 590,403 9925 mRNA_1558: 9926 - KOG4155 FOG WD40 repeat, at 590,667 to 593,724 9926 mRNA_1559: 9927 - Hypothetical Protein, at 594,333 to 596,246 9927 mRNA_1560: 9928 - HMMPfam-Bromodomain-PF00439,ProSiteProfiles-Bromodomain profile.-PS50014,SMART-bromo domain-SM00297,SUPERFAMILY--SSF47370, at 596,443 to 598,270 9928 mRNA_1561: 9929 - K01920 gshB, GSS glutathione synthase, at 598,631 to 600,413 9929
Group Condition mRNA_1557 mRNA_1558 mRNA_1559 mRNA_1560 mRNA_1561
9925 9926 9927 9928 9929
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -1.0 N.D. -3.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -2.0 +0.2 N.D. -2.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.7 N.D. -2.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.8 N.D. -0.8 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.3 N.D. -1.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.2 N.D. -0.3 N.D.
growth on oleic acid YNB Glucose -0.4 -0.4 N.D. +0.6 N.D.
growth on ypd YPD +0.3 -0.0 N.D. -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.7 N.D. -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.5 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.7 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.5 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.9 N.D. -0.1 N.D.
auxotrophy Dropout Complete +0.4 -0.0 N.D. +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 N.D. +1.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.2 N.D. +0.8 N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.2 N.D. +0.7 N.D.
auxotrophy YNB Glucose +0.1 -0.1 N.D. +1.5 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.2 N.D. +1.7 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.7 N.D. +1.2 N.D.
remove
mRNA_1557
plot		 remove
mRNA_1558
plot		 remove
mRNA_1559		 remove
mRNA_1560
plot		 remove
mRNA_1561
plot