Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9927 and 9928 are separated by 196 nucleotides9928 and 9929 are separated by 360 nucleotides9929 and 9930 are separated by 233 nucleotides9930 and 9931 are separated by 606 nucleotides mRNA_1559: 9927 - Hypothetical Protein, at 594,333 to 596,246 9927 mRNA_1560: 9928 - HMMPfam-Bromodomain-PF00439,ProSiteProfiles-Bromodomain profile.-PS50014,SMART-bromo domain-SM00297,SUPERFAMILY--SSF47370, at 596,443 to 598,270 9928 mRNA_1561: 9929 - K01920 gshB, GSS glutathione synthase, at 598,631 to 600,413 9929 mRNA_1562: 9930 - K17770 TOM20 mitochondrial import receptor subunit TOM20, at 600,647 to 601,701 9930 mRNA_1563: 9931 - Hypothetical Protein, at 602,308 to 602,781 9931
Group Condition mRNA_1559 mRNA_1560 mRNA_1561 mRNA_1562 mRNA_1563
9927 9928 9929 9930 9931
facs on lipid accumulation Sorted No BODIPY Gate N.D. -3.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -2.5 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -2.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -1.5 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.8 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.5 N.D. N.D. N.D.
growth on ypd YPD N.D. -0.3 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 N.D. N.D. N.D.
auxotrophy Dropout Complete N.D. +0.5 N.D. N.D. N.D.
growth on oleic acid YNB Glucose N.D. +0.6 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.7 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.8 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. +1.2 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +1.3 N.D. N.D. N.D.
auxotrophy YNB Glucose N.D. +1.5 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +1.7 N.D. N.D. N.D.
remove
mRNA_1559
plot		 remove
mRNA_1560
plot		 remove
mRNA_1561		 remove
mRNA_1562
plot		 remove
mRNA_1563
plot