Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9933 and 9934 are separated by 834 nucleotides
9934 and 9935 are separated by 190 nucleotides
9935 and 9936 are separated by 394 nucleotides
9936 and 9937 are separated by 175 nucleotides
mRNA_1565: 9933 - KOG1860 Nuclear protein export factor, at 604,614 to 609,512
9933
mRNA_1566: 9934 - Hypothetical Protein, at 610,347 to 612,663
9934
mRNA_1567: 9935 - KOG4129 Exopolyphosphatases and related proteins, at 612,854 to 615,039
9935
mRNA_1568: 9936 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 615,434 to 616,155
9936
mRNA_1569: 9937 - KOG3114 Uncharacterized conserved protein, at 616,331 to 617,555
9937
Group
Condition
mRNA
_1565
mRNA
_1566
mRNA
_1567
mRNA
_1568
mRNA
_1569
9933
9934
9935
9936
9937
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.0
-2.3
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
-0.0
-1.0
-0.6
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.7
+0.2
-0.9
-0.2
growth on oleic acid
YNB Glucose
N.D.
-0.4
+0.1
-1.3
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
+0.8
-0.8
-1.3
growth on ypd
YPD
N.D.
-0.2
-0.2
+0.2
-1.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.5
+0.2
+0.3
-0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
+0.0
-2.6
+1.6
growth on ricinoleic acid
YNB Glucose
N.D.
-0.6
+0.4
-0.6
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.6
+0.4
-0.9
-0.9
growth on oleic acid
YNB Oleic Acid
N.D.
-0.5
-0.1
-0.3
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.5
+0.4
-0.8
+0.6
auxotrophy
Dropout Complete
N.D.
-0.4
+0.4
-0.5
+0.7
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
+0.3
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
+0.1
+0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
+0.1
+0.5
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
+0.0
-0.7
+1.6
auxotrophy
YNB Glucose
N.D.
-0.4
+0.6
+0.4
+0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
+0.3
-0.1
+1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.1
-0.1
+1.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.3
+0.0
-0.6
+2.1
remove
mRNA_1565
plot
remove
mRNA_1566
plot
remove
mRNA_1567
remove
mRNA_1568
plot
remove
mRNA_1569
plot