Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9933 and 9934 are separated by 834 nucleotides9934 and 9935 are separated by 190 nucleotides9935 and 9936 are separated by 394 nucleotides9936 and 9937 are separated by 175 nucleotides mRNA_1565: 9933 - KOG1860 Nuclear protein export factor, at 604,614 to 609,512 9933 mRNA_1566: 9934 - Hypothetical Protein, at 610,347 to 612,663 9934 mRNA_1567: 9935 - KOG4129 Exopolyphosphatases and related proteins, at 612,854 to 615,039 9935 mRNA_1568: 9936 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 615,434 to 616,155 9936 mRNA_1569: 9937 - KOG3114 Uncharacterized conserved protein, at 616,331 to 617,555 9937
Group Condition mRNA_1565 mRNA_1566 mRNA_1567 mRNA_1568 mRNA_1569
9933 9934 9935 9936 9937
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.0 -2.3 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 -0.0 -1.0 -0.6
auxotrophy YNB Glucose 75mM Methionine N.D. -0.7 +0.2 -0.9 -0.2
growth on oleic acid YNB Glucose N.D. -0.4 +0.1 -1.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 +0.8 -0.8 -1.3
growth on ypd YPD N.D. -0.2 -0.2 +0.2 -1.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.5 +0.2 +0.3 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.0 -2.6 +1.6
growth on ricinoleic acid YNB Glucose N.D. -0.6 +0.4 -0.6 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.6 +0.4 -0.9 -0.9
growth on oleic acid YNB Oleic Acid N.D. -0.5 -0.1 -0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 +0.4 -0.8 +0.6
auxotrophy Dropout Complete N.D. -0.4 +0.4 -0.5 +0.7
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.3 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 +0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.1 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.0 -0.7 +1.6
auxotrophy YNB Glucose N.D. -0.4 +0.6 +0.4 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 +0.3 -0.1 +1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.1 -0.1 +1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.0 -0.6 +2.1
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