Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9936 and 9937 are separated by 175 nucleotides9937 and 9938 are separated by 191 nucleotides9938 and 9939 are separated by 792 nucleotides9939 and 9940 are separated by 505 nucleotides mRNA_1568: 9936 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 615,434 to 616,155 9936 mRNA_1569: 9937 - KOG3114 Uncharacterized conserved protein, at 616,331 to 617,555 9937 mRNA_1570: 9938 - KOG2533 Permease of the major facilitator superfamily, at 617,747 to 619,889 9938 mRNA_1571: 9939 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 620,682 to 623,667 9939 mRNA_1572: 9940 - K02139 ATPeFF, ATP17 F-type H+-transporting ATPase subunit f, at 624,173 to 624,749 9940
Group Condition mRNA_1568 mRNA_1569 mRNA_1570 mRNA_1571 mRNA_1572
9936 9937 9938 9939 9940
ypd buoyancy 40 hrs No Buoyancy Separation -2.3 -0.6 -0.1 -1.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -1.3 -0.2 -0.1 N.D.
growth on ypd YPD +0.2 -1.0 -0.2 -0.8 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.9 -0.1 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.6 -0.2 +0.5 N.D.
growth on oleic acid YNB Glucose -1.3 +0.1 +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -2.6 +1.6 -0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.9 -0.2 +0.0 +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.1 -0.6 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.9 +0.2 -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.6 -0.0 +0.4 +0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.3 +0.3 +0.0 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 +0.6 +0.2 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 +1.6 +0.0 -0.3 N.D.
auxotrophy Dropout Complete -0.5 +0.7 -0.0 +0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 +0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +1.2 +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.0 +0.3 +0.5 N.D.
auxotrophy YNB Glucose +0.4 +0.4 +0.2 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +1.0 +0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +2.1 +0.2 +0.3 N.D.
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