Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9938 and 9939 are separated by 792 nucleotides9939 and 9940 are separated by 505 nucleotides9940 and 9941 are separated by 534 nucleotides9941 and 9942 are separated by 161 nucleotides mRNA_1570: 9938 - KOG2533 Permease of the major facilitator superfamily, at 617,747 to 619,889 9938 mRNA_1571: 9939 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 620,682 to 623,667 9939 mRNA_1572: 9940 - K02139 ATPeFF, ATP17 F-type H+-transporting ATPase subunit f, at 624,173 to 624,749 9940 mRNA_1573: 9941 - KOG2022 Nuclear transport receptor LGL2 (importin beta superfamily), at 625,284 to 628,967 9941 mRNA_1574: 9942 - K06867 K06867 uncharacterized protein, at 629,129 to 634,398 9942
Group Condition mRNA_1570 mRNA_1571 mRNA_1572 mRNA_1573 mRNA_1574
9938 9939 9940 9941 9942
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 N.D. -0.1 -2.9
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 N.D. +0.2 -2.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 N.D. -0.4 -1.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.3 N.D. -0.5 -1.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.5 N.D. -0.5 -2.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 N.D. -0.5 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.3 N.D. -0.1 -0.4
growth on ricinoleic acid YNB Glucose +0.4 +0.1 N.D. -0.1 -1.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.1 N.D. +0.7 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.5 N.D. +0.3 -1.1
auxotrophy Dropout Complete -0.0 +0.6 N.D. -0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.6 N.D. +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.5 N.D. -0.4 -0.4
growth on ypd YPD -0.2 -0.8 N.D. -0.0 +1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 N.D. +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 N.D. -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.4 N.D. -0.3 +0.0
growth on oleic acid YNB Oleic Acid +0.0 -0.1 N.D. -0.2 +0.4
auxotrophy YNB Glucose +0.2 +0.4 N.D. -0.2 -0.2
growth on oleic acid YNB Glucose +0.1 +0.1 N.D. -0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 N.D. +0.2 +0.6
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