Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9944 and 9945 are separated by 187 nucleotides9945 and 9946 are separated by 336 nucleotides9946 and 9947 are separated by 1917 nucleotides9947 and 9948 are separated by 285 nucleotides mRNA_1576: 9944 - KOG0737 AAA+-type ATPase, at 636,089 to 637,669 9944 mRNA_1577: 9945 - K03844 ALG11 alpha-1,2-mannosyltransferase, at 637,857 to 639,925 9945 mRNA_1578: 9946 - K20237 NUD1 protein NUD1, at 640,262 to 646,467 9946 mRNA_1579: 9947 - Hypothetical Protein, at 648,385 to 649,747 9947 mRNA_1580: 9948 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 650,033 to 651,263 9948
Group Condition mRNA_1576 mRNA_1577 mRNA_1578 mRNA_1579 mRNA_1580
9944 9945 9946 9947 9948
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.4 N.D. -0.1 -0.2 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 N.D. -0.3 -1.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.1 N.D. -0.0 +0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.1 -0.7 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 N.D. -0.2 -0.4 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 N.D. -0.1 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. +0.1 -0.7 -0.3
growth on oleic acid YNB Oleic Acid -0.2 N.D. +0.0 -1.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. -0.0 -0.2 -0.2
auxotrophy Dropout Complete -0.1 N.D. -0.2 -0.3 +0.1
growth on oleic acid YNB Glucose +0.1 N.D. +0.0 -0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.0 -0.4 +0.0
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.3 -0.4 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. -0.0 -0.7 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 -0.0 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. +0.4 -0.5 +0.0
auxotrophy YNB Glucose +0.4 N.D. +0.0 -0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.3 -0.4 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.2 +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.6 -0.7 +0.8
growth on ypd YPD +0.8 N.D. -0.0 +0.2 +0.2
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