Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9945 and 9946 are separated by 336 nucleotides9946 and 9947 are separated by 1917 nucleotides9947 and 9948 are separated by 285 nucleotides9948 and 9949 are separated by 523 nucleotides mRNA_1577: 9945 - K03844 ALG11 alpha-1,2-mannosyltransferase, at 637,857 to 639,925 9945 mRNA_1578: 9946 - K20237 NUD1 protein NUD1, at 640,262 to 646,467 9946 mRNA_1579: 9947 - Hypothetical Protein, at 648,385 to 649,747 9947 mRNA_1580: 9948 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 650,033 to 651,263 9948 mRNA_1581: 9949 - HMMPfam-Protein of unknown function (DUF3759)-PF12585, at 651,787 to 652,843 9949
Group Condition mRNA_1577 mRNA_1578 mRNA_1579 mRNA_1580 mRNA_1581
9945 9946 9947 9948 9949
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 -1.2 +0.3 -0.6
growth on oleic acid YNB Oleic Acid N.D. +0.0 -1.0 +0.2 -0.9
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.7 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.7 -0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 -0.7 +0.2 -0.5
growth on ricinoleic acid YNB Glucose N.D. +0.3 -0.4 +0.3 -1.0
auxotrophy Dropout Complete N.D. -0.2 -0.3 +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 -0.4 +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 -0.5 +0.0 -0.6
growth on oleic acid YNB Glucose N.D. +0.0 -0.4 -0.1 -0.1
auxotrophy YNB Glucose N.D. +0.0 -0.3 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.4 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.1 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.2 -0.6 +0.7
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 -0.2 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.6 -0.7 +0.8 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 +0.2 -0.5 +0.4
growth on ypd YPD N.D. -0.0 +0.2 +0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 -0.4 +0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.2 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.0 +0.0 +0.6
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